Ontologies, Classifications, and Coding

Building a Semantic Health Data Warehouse in the Context of Clinical Trials: Development and Usability Study

Romain Lelong, Lina F Soualmia, Julien Grosjean, Mehdi Taalba, Stéfan J Darmoni

JMIR Med Inform 2019 (Dec 20); 7(4):e13917

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Mapping ICD-10 and ICD-10-CM Codes to Phecodes: Workflow Development and Initial Evaluation

Patrick Wu, Aliya Gifford, Xiangrui Meng, Xue Li, Harry Campbell, Tim Varley, Juan Zhao, Robert Carroll, Lisa Bastarache, Joshua C Denny, Evropi Theodoratou, Wei-Qi Wei

JMIR Med Inform 2019 (Nov 29); 7(4):e14325

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Common Data Elements for Acute Coronary Syndrome: Analysis Based on the Unified Medical Language System

Markus Kentgen, Julian Varghese, Alexander Samol, Johannes Waltenberger, Martin Dugas

JMIR Med Inform 2019 (Aug 23); 7(3):e14107

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Core Data Elements in Acute Myeloid Leukemia: A Unified Medical Language System–Based Semantic Analysis and Experts’ Review

Christian Holz, Torsten Kessler, Martin Dugas, Julian Varghese

JMIR Med Inform 2019 (Aug 12); 7(3):e13554

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Projection Word Embedding Model With Hybrid Sampling Training for Classifying ICD-10-CM Codes: Longitudinal Observational Study

Chin Lin, Yu-Sheng Lou, Dung-Jang Tsai, Chia-Cheng Lee, Chia-Jung Hsu, Ding-Chung Wu, Mei-Chuen Wang, Wen-Hui Fang

JMIR Med Inform 2019 (Jul 23); 7(3):e14499

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Identification of Knee Osteoarthritis Based on Bayesian Network: Pilot Study

Bo Sheng, Liang Huang, Xiangbin Wang, Jie Zhuang, Lihua Tang, Chao Deng, Yanxin Zhang

JMIR Med Inform 2019 (Jul 18); 7(3):e13562

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Influence of Scribes on Patient-Physician Communication in Primary Care Encounters: Mixed Methods Study

Shivang U Danak, Timothy C Guetterman, Melissa A Plegue, Heather L Holmstrom, Reema Kadri, Alexander Duthler, Anne Yoo, Lorraine R Buis

JMIR Med Inform 2019 (Jul 11); 7(3):e14797

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Visibility of Community Nursing Within an Administrative Health Classification System: Evaluation of Content Coverage

Lorraine J Block, Leanne M Currie, Nicholas R Hardiker, Gillian Strudwick

J Med Internet Res 2019 (Jun 26); 21(6):e12847

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Mining of Textual Health Information from Reddit: Analysis of Chronic Diseases With Extracted Entities and Their Relations

Vasiliki Foufi, Tatsawan Timakum, Christophe Gaudet-Blavignac, Christian Lovis, Min Song

J Med Internet Res 2019 (Jun 13); 21(6):e12876

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Sentiment Analysis of Social Media on Childhood Vaccination: Development of an Ontology

Jeongah On, Hyeoun-Ae Park, Tae-Min Song

J Med Internet Res 2019 (Jun 12); 21(6):e13456

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Accuracy of ICD Codes for Identification: Review of Chlamydia, Gonorrhea and Syphilis

Yenling A. Ho, Saurabh Rahurkar, Janet Arno, Brian E. Dixon

Online J Public Health Inform 2019 (May 30); 11(1):e62370

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Development of a Consumer Health Vocabulary by Mining Health Forum Texts Based on Word Embedding: Semiautomatic Approach

Gen Gu, Xingting Zhang, Xingeng Zhu, Zhe Jian, Ken Chen, Dong Wen, Li Gao, Shaodian Zhang, Fei Wang, Handong Ma, Jianbo Lei

JMIR Med Inform 2019 (May 23); 7(2):e12704

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Adverse Childhood Experiences Ontology for Mental Health Surveillance, Research, and Evaluation: Advanced Knowledge Representation and Semantic Web Techniques

Jon Hael Brenas, Eun Kyong Shin, Arash Shaban-Nejad

JMIR Ment Health 2019 (May 21); 6(5):e13498

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Fast Healthcare Interoperability Resources, Clinical Quality Language, and Systematized Nomenclature of Medicine—Clinical Terms in Representing Clinical Evidence Logic Statements for the Use of Imaging Procedures: Descriptive Study

Eseosa Odigie, Ronilda Lacson, Ali Raja, David Osterbur, Ivan Ip, Louise Schneider, Ramin Khorasani

JMIR Med Inform 2019 (May 13); 7(2):e13590

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Identifying Clinical Terms in Medical Text Using Ontology-Guided Machine Learning

Aryan Arbabi, David R Adams, Sanja Fidler, Michael Brudno

JMIR Med Inform 2019 (May 10); 7(2):e12596

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Developing a Physical Activity Ontology to Support the Interoperability of Physical Activity Data

Hyeoneui Kim, Jessica Mentzer, Ricky Taira

J Med Internet Res 2019 (Apr 23); 21(4):e12776

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Genomic Common Data Model for Seamless Interoperation of Biomedical Data in Clinical Practice: Retrospective Study

Seo Jeong Shin, Seng Chan You, Yu Rang Park, Jin Roh, Jang-Hee Kim, Seokjin Haam, Christian G Reich, Clair Blacketer, Dae-Soon Son, Seungbin Oh, Rae Woong Park

J Med Internet Res 2019 (Mar 26); 21(3):e13249

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SNOMED CT Concept Hierarchies for Computable Clinical Phenotypes From Electronic Health Record Data: Comparison of Intensional Versus Extensional Value Sets

Ling Chu, Vaishnavi Kannan, Mujeeb A Basit, Diane J Schaeflein, Adolfo R Ortuzar, Jimmie F Glorioso, Joel R Buchanan, Duwayne L Willett

JMIR Med Inform 2019 (Jan 16); 7(1):e11487

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