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JMIR Medical Informatics

Clinical informatics, decision support for health professionals, electronic health records, and eHealth infrastructures.

Editor-in-Chief:

Arriel Benis, PhD, FIAHSI, Associate Professor and Head of the Department of Digital Medical Technologies, Holon Institute of Technology (HIT), Israel


Impact Factor 3.8 More information about Impact Factor CiteScore 7.7 More information about CiteScore

JMIR Medical Informatics (JMI, ISSN 2291-9694, Journal Impact Factor 3.8) (Editor-in-chief: Arriel Benis, PhD, FIAHSI) is an open-access journal that focuses on the challenges and impacts of clinical informatics, digitalization of care processes, clinical and health data pipelines from acquisition to reuse, including semantics, natural language processing, natural interactions, meaningful analytics and decision support, electronic health records, infrastructures, implementation, and evaluation (see Focus and Scope).

JMIR Medical Informatics adheres to rigorous quality standards, involving a rapid and thorough peer-review process, professional copyediting, and professional production of PDF, XHTML, and XML proofs.

The journal is indexed in MEDLINEPubMedPubMed CentralDOAJ, Scopus, and the Science Citation Index Expanded (SCIE)

JMIR Medical Informatics received a Journal Impact Factor of 3.8 (Source:Journal Citation Reports 2025 from Clarivate).

JMIR Medical Informatics received a Scopus CiteScore of 7.7 (2024), placing it in the 79th percentile (#32 of 153) as a Q1 journal in the field of Health Informatics.

Recent Articles

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Electronic Health Records

Repeated blood product ordering is associated with order entry errors and potential patient harm. Traditional electronic health record order sets require repeated re-entry for recurrent transfusions, creating inefficiencies and opportunities for error, and contributing to physician burnout. Historically, we have used order sets to order blood products, which must be re-entered each time a transfusion is needed. Reusable transfusion therapy plans may address these challenges by standardizing and streamlining transfusion workflows. We conducted a pre-post study at a single pediatric academic center, evaluating the implementation of reusable transfusion therapy plans for packed red blood cells and platelets in oncology patients and those undergoing hematopoietic stem cell transplantation.

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Visualization in eHealth

Acquiring medical expertise from the vast body of medical text is a critical component of medical education. However, the majority of medical knowledge resides in unstructured texts. Data heterogeneity across institutions and strict privacy regulations hinder the use of general-purpose analysis tools. This creates a substantial barrier to the efficient acquisition of expertise for learners.

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Machine Learning

Echocardiography is a fundamental imaging modality for the diagnosis of heart disease (HD), but its interpretation remains operator-dependent and lacks standardized, data-driven decision support. Although artificial intelligence has improved image-based diagnosis, the added value and interpretability of integrating routinely collected electronic medical records (EMRs) with echocardiogram (ECHO) for large-scale screening remain underexplored.

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New Technologies

Current urinary and drainage catheter systems collect fluids for visual inspection or manual sampling, offering limited diagnostic value while being labor-intensive and prone to error. Machine learning (ML) has the potential to automate the analysis of these fluids. However, existing methods rely on complex preprocessing steps, which hinder real-time analysis.

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Decision Support for Health Professionals

Antibiotic therapies are the main treatment for bacterial infections, but growing antibiotic resistance is a major global health threat, severely impacting patients with sepsis. Rapid selection of the most effective antibiotic therapy is critical for survival and for preventing further resistance. Physicians must consider numerous factors for proper empiric treatment selection. A clinical decision support system (CDSS) aims to support physicians in this process, facilitating rapid and targeted therapy.

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Machine Learning

The maintenance and progression of pregnancy rely on immune homeostasis at the maternal-fetal interface. However, pregnancy complicated by autoimmune abnormalities can disrupt this balance and significantly increase the risk of adverse pregnancy outcomes (APOs).

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Tools, Programs and Algorithms

The widespread adoption of electronic health records has resulted in the generation of large volumes of clinical notes. Learning algorithms and large language models can be trained on these resources, but they are susceptible to noise—irrelevant or noninformative data. This sensitivity can lead to significant challenges, including performance degradation and the generation of inaccurate predictions or “hallucinations.” This study addresses a critical challenge in clinical informatics: efficiently filtering millions of documents for relevance before advanced language model processing, particularly in resource-constrained environments.

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AI Language Models in Health Care

Large language models (LLMs) are increasingly used to summarize clinical documents; yet, automated metrics often inadequately capture clinical relevance and safety. In the initial phase of the “Framework and Implementation of AI Tools,” an expert-driven, cocreated evaluation methodology was established to assess LLM-generated discharge letter summaries, combining prompt design considerations with intuitive expert appraisal.

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Natural Language Processing

The accurate classification of operative notes is essential for surgical outcomes research; however, CPT code classification is notoriously nonspecific for many procedures. In such situations, the operative note (or “dictation”) must be reviewed manually, a process that is labor-intensive and unsustainable. Natural language processing demonstrates tremendous potential for improving the efficiency and accuracy of procedure classification from unstructured operative notes. To date, it remains unexplored whether natural language processing can reliably differentiate between complex, multicomponent procedures, such as those involved in the care of cleft lip or palate and craniofacial anomalies.

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Machine Learning

Obstructive sleep apnea (OSA) affects nearly one billion people globally and poses a substantial public health threat. Effective and accessible methods for OSA risk identification are urgently needed.

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Natural Language Processing

Retrieval-augmented generation (RAG) systems increasingly support clinical decision-making by grounding large language model outputs in verifiable evidence. The retrieval component is foundational: if the correct document is not retrieved, downstream generation cannot recover it. Despite this, embedding model selection for clinical RAG remains guided by general-domain benchmarks with limited clinical coverage. Given the heterogeneity of clinical documentation across institutions, specialties, and electronic health record systems, it is unclear whether general-domain model rankings generalize to clinical retrieval tasks.

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Machine Learning

Coughing is a common clinical symptom and a protective respiratory reflex closely associated with various respiratory system diseases. The acoustic characteristics of cough sounds are influenced by underlying pathological factors, with distinct acoustic signatures corresponding to different etiologies. Through rigorous analysis of these sounds, rapid identification and preliminary diagnosis of related conditions may be achieved. This approach holds great potential for broad application in mobile health and ubiquitous health platforms.

Preprints Open for Peer Review

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