Ontologies, Classifications, and Coding

Large Language Model–Enhanced Drug Repositioning Knowledge Extraction via Long Chain-of-Thought: Development and Evaluation Study

Hongyu Kang, Jiao Li, Li Hou, Xiaowei Xu, Si Zheng, Qin Li

JMIR Med Inform 2025 (Oct 07); 13:e77837

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Taxonomy Portraits: Deciphering the Hierarchical Relationships of Medical Large Language Models

Radha Nagarajan, Vanessa Klotzman, Midori Kondo, Sandip Godambe, Adam Gold, John Henderson, Steven Martel

JMIR Med Inform 2025 (Oct 07); 13:e72918

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YOLOv12 Algorithm-Aided Detection and Classification of Lateral Malleolar Avulsion Fracture and Subfibular Ossicle Based on CT Images: Multicenter Study

Jiayi Liu, Peng Sun, Yousheng Yuan, Zihan Chen, Ke Tian, Qian Gao, Xiangsheng Li, Liang Xia, Jun Zhang, Nan Xu

JMIR Med Inform 2025 (Oct 03); 13:e79064

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Identification of Syndrome Types in Patients With Pancreatic Cancer From Free Text in Electronic Medical Records: Model Development and Validation

He Ba, Haojie Du, Chienshan Cheng, Yuan Zhang, Linjie Ruan, Zhen Chen

JMIR Form Res 2025 (Oct 03); 9:e70602

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Severity Classification of Anxiety and Depression Using Generalized Anxiety Disorder Scale and Patient Health Questionnaire: National Cross-Sectional Study Applying Classification and Regression Tree Models

Andre Faro, Julian Tejada, Wael Al-Delaimy

JMIR Public Health Surveill 2025 (Sep 30); 11:e72591

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Identifying and Reducing Stigmatizing Language in Home Health Care With a Natural Language Processing–Based System (ENGAGE): Protocol for a Mixed Methods Study

Zhihong Zhang, Pallavi Gupta, Stephanie Potts-Thompson, Laura Prescott, Morgan Morrison, Scott Sittig, Margaret V McDonald, Chase Raymond, Jacquelyn Y Taylor, Maxim Topaz

JMIR Res Protoc 2025 (Sep 25); 14:e69753

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Large Language Model–Supported Identification of Intellectual Disabilities in Clinical Free-Text Summaries: Mixed Methods Study

Aleksandra Edwards, Antonio F Pardiñas, George Kirov, Elliott Rees, Jose Camacho-Collados

JMIR AI 2025 (Sep 18); 4:e72256

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Neural Activity Disparities in Deficiency and Excess Patterns of Depression: Protocol for a Systematic Review and Meta-Analysis

Liling Chen, Xinyu Jia, Jianjun Wang, Liling Li, Jianxiang Chen, Songjun Lin, Haotao Zheng, Xinbei Li, Xiude Qin, Lanying Liu, Hanqing Lyu

JMIR Res Protoc 2025 (Sep 18); 14:e68996

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Leveraging GPT-4o for Automated Extraction and Categorization of CAD-RADS Features From Free-Text Coronary CT Angiography Reports: Diagnostic Study

Youmei Chen, Mengshi Dong, Jie Sun, Zhanao Meng, Yiqing Yang, Abudushalamu Muhetaier, Chao Li, Jie Qin

JMIR Med Inform 2025 (Sep 10); 13:e70967

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Predicting Unplanned Readmission Risk in Patients With Cirrhosis: Complication-Aware Dynamic Classifier Selection Approach

Zixin Shi, Linjun Huang, Xiaomei Xu, Kexue Pu, Qingpeng Zhang, Haolin Wang

JMIR Med Inform 2025 (Sep 10); 13:e63581

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The Art of the Special Interest: Lexicon-Based Analysis of Longitudinal Changes in Language Patterns Among Neurodiverse Youth Designing Special Interest–Related Digital Art

Celeste Campos-Castillo, Elise Atkinson, Uta Nishii

J Med Internet Res 2025 (Sep 08); 27:e59976

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Identifying Firearm Violence Exposure in Primary Care Clinical Notes: Protocol for Developing a National Language Processing Text Classifier

Natalie Carwright, Frances M Biel, Megan Hoopes, Ali Al Bataineh, Pedro Rivera, Kerry Bet, Nicole Cook

JMIR Res Protoc 2025 (Sep 05); 14:e76681

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Deep Learning Radiomics Model Based on Computed Tomography Image for Predicting the Classification of Osteoporotic Vertebral Fractures: Algorithm Development and Validation

Jiayi Liu, Lincen Zhang, Yousheng Yuan, Jun Tang, Yongkang Liu, Liang Xia, Jun Zhang

JMIR Med Inform 2025 (Aug 29); 13:e75665

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A Machine Learning Approach for Identifying People With Neuroinfectious Diseases in Electronic Health Records: Algorithm Development and Validation

Arjun Singh, Shadi Sartipi, Haoqi Sun, Rebecca Milde, Niels Turley, Carson Quinn, G Kyle Harrold, Rebecca L Gillani, Sarah E Turbett, Sudeshna Das, Sahar Zafar, Marta Fernandes, M Brandon Westover, Shibani S Mukerji

JMIR Med Inform 2025 (Aug 29); 13:e63157

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Natural Language Processing and ICD-10 Coding for Detecting Bleeding Events in Discharge Summaries: Comparative Cross-Sectional Study

Frederic Gaspar, Mehdi Zayene, Claire Coumau, Elliott Bertrand, Marie Bettex, Marie Annick Le Pogam, Chantal Csajka

JMIR Med Inform 2025 (Aug 29); 13:e67837

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Development of a Large-Scale Dataset of Chest Computed Tomography Reports in Japanese and a High-Performance Finding Classification Model: Dataset Development and Validation Study

Yosuke Yamagishi, Yuta Nakamura, Tomohiro Kikuchi, Yuki Sonoda, Hiroshi Hirakawa, Shintaro Kano, Satoshi Nakamura, Shouhei Hanaoka, Takeharu Yoshikawa, Osamu Abe

JMIR Med Inform 2025 (Aug 28); 13:e71137

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Prediction of Mini-Mental State Examination Scores for Cognitive Impairment and Machine Learning Analysis of Oral Health and Demographic Data Among Individuals Older Than 60 Years: Cross-Sectional Study

Alper Idrisoglu, Johan Flyborg, Sarah Nauman Ghazi, Elina Mikaelsson Midlöv, Helén Dellkvist, Anna Axén, Ana Luiza Dallora

JMIR Med Inform 2025 (Aug 25); 13:e75069

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Label Accuracy in Electronic Health Records and Its Impact on Machine Learning Models for Early Prediction of Gestational Diabetes: 3-Step Retrospective Validation Study

Mark Germaine, Amy C O'Higgins, Brendan Egan, Graham Healy

JMIR Med Inform 2025 (Aug 21); 13:e72938

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Leveraging Retrieval-Augmented Large Language Models for Dietary Recommendations With Traditional Chinese Medicine’s Medicine Food Homology: Algorithm Development and Validation

Hangyu Sha, Fan Gong, Bo Liu, Runfeng Liu, Haofen Wang, Tianxing Wu

JMIR Med Inform 2025 (Aug 21); 13:e75279

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Deep Learning for the Early Detection of Invasive Ductal Carcinoma in Histopathological Images: Convolutional Neural Network Approach With Transfer Learning

Naga Shreya Chilumukuru, Pragya Priyadarshini, Yawo Ezunkpe

JMIR Form Res 2025 (Aug 21); 9:e62996

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