Genomics and Bioinformatics for Clinical Use

Deep Learning–Based Identification of Tissue of Origin for Carcinomas of Unknown Primary Using MicroRNA Expression: Algorithm Development and Validation

Ananya Raghu, Anisha Raghu, Jillian F Wise

JMIR Bioinform Biotech 2024 (Jul 24); 5:e56538

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Identifying Depression Through Machine Learning Analysis of Omics Data: Scoping Review

Brittany Taylor, Mollie Hobensack, Stephanie Niño de Rivera, Yihong Zhao, Ruth Masterson Creber, Kenrick Cato

JMIR Nursing 2024 (Jul 19); 7:e54810

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Policy Guidance for Direct-to-Consumer Genetic Testing Services: Framework Development Study

Suzanne Maria Onstwedder, Marleen Elizabeth Jansen, Martina Cornelia Cornel, Tessel Rigter

J Med Internet Res 2024 (Jul 17); 26:e47389

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Research Trends and Evolution in Radiogenomics (2005-2023): Bibliometric Analysis

Meng Wang, Yun Peng, Ya Wang, Dehong Luo

Interact J Med Res 2024 (Jul 09); 13:e51347

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It Is in Our DNA: Bringing Electronic Health Records and Genomic Data Together for Precision Medicine

Alan J Robertson, Andrew J Mallett, Zornitza Stark, Clair Sullivan

JMIR Bioinform Biotech 2024 (Jun 13); 5:e55632

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Assessing Privacy Vulnerabilities in Genetic Data Sets: Scoping Review

Mara Thomas, Nuria Mackes, Asad Preuss-Dodhy, Thomas Wieland, Markus Bundschus

JMIR Bioinform Biotech 2024 (May 27); 5:e54332

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A Predictive Noninvasive Single-Nucleotide Variation–Based Biomarker Signature for Resectable Pancreatic Cancer: Protocol for a Prospective Validation Study

Nico Seeger, Stefan Gutknecht, Irin Zschokke, Isabella Fleischmann, Nadja Roth, Jürg Metzger, Markus Weber, Stefan Breitenstein, Lukasz Filip Grochola

JMIR Res Protoc 2024 (May 13); 13:e54042

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Effectiveness of Self-Collected, Ambient Temperature–Preserved Nasal Swabs Compared to Samples Collected by Trained Staff for Genotyping of Respiratory Viruses by Shotgun RNA Sequencing: Comparative Study

Raymond Soto, Litty Paul, Christina A Porucznik, Heng Xie, Rita Czako Stinnett, Benjamin Briggs, Matthew Biggerstaff, Joseph Stanford, Robert Schlaberg

JMIR Form Res 2023 (Nov 24); 7:e32848

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Secure Comparisons of Single Nucleotide Polymorphisms Using Secure Multiparty Computation: Method Development

Andrew Woods, Skyler T Kramer, Dong Xu, Wei Jiang

JMIR Bioinform Biotech 2023 (Jul 18); 4:e44700

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Effects of Pharmacogenomic Testing in Clinical Pain Management: Retrospective Study

Christian Tagwerker, Mary Jane Carias-Marines, David J Smith

JMIRx Med 2022 (May 03); 3(2):e32902

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The Easy-to-Use SARS-CoV-2 Assembler for Genome Sequencing: Development Study

Martina Rueca, Emanuela Giombini, Francesco Messina, Barbara Bartolini, Antonino Di Caro, Maria Rosaria Capobianchi, Cesare EM Gruber

JMIR Bioinform Biotech 2022 (Mar 14); 3(1):e31536

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Genomic Health Literacy Interventions in Pediatrics: Scoping Review

Aarushi Gupta, Joseph A Cafazzo, Maarten J IJzerman, Joost F Swart, Sebastiaan Vastert, Nico M Wulffraat, Susanne Benseler, Deborah Marshall, Rae Yeung, Marinka Twilt

J Med Internet Res 2021 (Dec 24); 23(12):e26684

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A Blockchain-Based Dynamic Consent Architecture to Support Clinical Genomic Data Sharing (ConsentChain): Proof-of-Concept Study

Faisal Albalwy, Andrew Brass, Angela Davies

JMIR Med Inform 2021 (Nov 03); 9(11):e27816

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Multiscale Biology of Cardiovascular Risk in Psoriasis: Protocol for a Case-Control Study

Hannah Kaiser, Amanda Kvist-Hansen, Christine Becker, Xing Wang, Benjamin D McCauley, Martin Krakauer, Peter Michael Gørtz, Kristoffer Mads Aaris Henningsen, Claus Zachariae, Lone Skov, Peter Riis Hansen

JMIR Res Protoc 2021 (Sep 28); 10(9):e28669

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Exploring the Use of Genomic and Routinely Collected Data: Narrative Literature Review and Interview Study

Helen Daniels, Kerina Helen Jones, Sharon Heys, David Vincent Ford

J Med Internet Res 2021 (Sep 24); 23(9):e15739

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Characterization of Global Research Trends and Prospects on Single-Cell Sequencing Technology: Bibliometric Analysis

Quan Wang, Ke-Lu Yang, Zhen Zhang, Zhu Wang, Chen Li, Lun Li, Jin-Hui Tian, Ying-Jiang Ye, Shan Wang, Ke-Wei Jiang

J Med Internet Res 2021 (Aug 10); 23(8):e25789

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A Biomedical Knowledge Graph System to Propose Mechanistic Hypotheses for Real-World Environmental Health Observations: Cohort Study and Informatics Application

Karamarie Fecho, Chris Bizon, Frederick Miller, Shepherd Schurman, Charles Schmitt, William Xue, Kenneth Morton, Patrick Wang, Alexander Tropsha

JMIR Med Inform 2021 (Jul 20); 9(7):e26714

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Fast Healthcare Interoperability Resources (FHIR)–Based Quality Information Exchange for Clinical Next-Generation Sequencing Genomic Testing: Implementation Study

Donghyeong Seong, Sungwon Jung, Sungchul Bae, Jongsuk Chung, Dae-Soon Son, Byoung-Kee Yi

J Med Internet Res 2021 (Apr 28); 23(4):e26261

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The Implementation Science for Genomic Health Translation (INSIGHT) Study in Epilepsy: Protocol for a Learning Health Care System

Elena Valeryevna Feofanova, Guo-Qiang Zhang, Samden Lhatoo, Ginger A Metcalf, Eric Boerwinkle, Eric Venner

JMIR Res Protoc 2021 (Mar 26); 10(3):e25576

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Phenotypically Similar Rare Disease Identification from an Integrative Knowledge Graph for Data Harmonization: Preliminary Study

Qian Zhu, Dac-Trung Nguyen, Gioconda Alyea, Karen Hanson, Eric Sid, Anne Pariser

JMIR Med Inform 2020 (Oct 02); 8(10):e18395

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