This paper is in the following e-collection/theme issue:

Methods and Instruments in Medical Informatics (135)

Published on in Vol 7, No 4 (2019): Oct-Dec

Preprints (earlier versions) of this paper are available at https://preprints.jmir.org/preprint/14667, first published .
Developing a Reproducible Microbiome Data Analysis Pipeline Using the Amazon Web Services Cloud for a Cancer Research Group: Proof-of-Concept Study

Developing a Reproducible Microbiome Data Analysis Pipeline Using the Amazon Web Services Cloud for a Cancer Research Group: Proof-of-Concept Study

Developing a Reproducible Microbiome Data Analysis Pipeline Using the Amazon Web Services Cloud for a Cancer Research Group: Proof-of-Concept Study

Authors of this article:

Jinbing Bai1, 2 Author Orcid Image ;   Ileen Jhaney3 Author Orcid Image ;   Jessica Wells1, 2 Author Orcid Image
Article Authors Cited by (10) Tweetations (7) Metrics

Journals

  1. Bai J, Bruner D, Fedirko V, Beitler J, Zhou C, Gu J, Zhao H, Lin I, Chico C, Higgins K, Shin D, Saba N, Miller A, Xiao C. Gut Microbiome Associated with the Psychoneurological Symptom Cluster in Patients with Head and Neck Cancers. Cancers 2020;12(9):2531 View
  2. Kim S, Zhang W, Pak V, Aqua J, Hertzberg V, Spahr C, Slavich G, Bai J. How stress, discrimination, acculturation and the gut microbiome affect depression, anxiety and sleep among Chinese and Korean immigrants in the USA: a cross-sectional pilot study protocol. BMJ Open 2021;11(7):e047281 View
  3. He P, Zhang B, Shen S, Rajakani K. Effects of Out-of-Hospital Continuous Nursing on Postoperative Breast Cancer Patients by Medical Big Data. Journal of Healthcare Engineering 2022;2022:1 View
  4. Bai J, Shen N, Liu Y. Associations between the Gut Microbiome and Migraines in Children Aged 7-18 Years: An Analysis of the American Gut Project Cohort. Pain Management Nursing 2023;24(1):35 View
  5. Bai J, Zhang W, Choi D, Kim S. Methodology Considerations in Studying Mental Health, Sleep Quality, and Biopsychosocial Determinants Among Chinese and Korean Americans During the COVID-19 Pandemic. Asian/Pacific Island Nursing Journal 2022;6(1):e39760 View
  6. Subramanian H. A Decentralized Marketplace for Patient-Generated Health Data: Design Science Approach. Journal of Medical Internet Research 2023;25:e42743 View
  7. Xu B, Zhou F. The Roles of Cloud-Based Systems on the Cancer-Related Studies: A Systematic Literature Review. IEEE Access 2022;10:64126 View
  8. Richardson B, Noh H, Webster C, Zhang W, Kim S, Yang I, Bai J. Oral Microbiome, Mental Health, and Sleep Outcomes During the COVID-19 Pandemic: An Observational Study in Chinese and Korean American Immigrants. OMICS: A Journal of Integrative Biology 2023;27(4):180 View
  9. Hakimzadeh A, Abdala Asbun A, Albanese D, Bernard M, Buchner D, Callahan B, Caporaso J, Curd E, Djemiel C, Brandström Durling M, Elbrecht V, Gold Z, Gweon H, Hajibabaei M, Hildebrand F, Mikryukov V, Normandeau E, Özkurt E, M. Palmer J, Pascal G, Porter T, Straub D, Vasar M, Větrovský T, Zafeiropoulos H, Anslan S. A pile of pipelines: An overview of the bioinformatics software for metabarcoding data analyses. Molecular Ecology Resources 2024;24(5) View

Books/Policy Documents

  1. Ghosh S, Dasgupta R. Machine Learning in Biological Sciences. View