Ontologies, Classifications, and Coding

Automated Pathologic TN Classification Prediction and Rationale Generation From Lung Cancer Surgical Pathology Reports Using a Large Language Model Fine-Tuned With Chain-of-Thought: Algorithm Development and Validation Study

Sanghwan Kim, Sowon Jang, Borham Kim, Leonard Sunwoo, Seok Kim, Jin-Haeng Chung, Sejin Nam, Hyeongmin Cho, Donghyoung Lee, Keehyuck Lee, Sooyoung Yoo

JMIR Med Inform 2024 (Dec 20); 12:e67056

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Implementing Findable, Accessible, Interoperable, Reusable (FAIR) Principles in Child and Adolescent Mental Health Research: Mixed Methods Approach

Rowdy de Groot, Frank van der Graaff, Daniël van der Doelen, Michiel Luijten, Ronald De Meyer, Hekmat Alrouh, Hedy van Oers, Jacintha Tieskens, Josjan Zijlmans, Meike Bartels, Arne Popma, Nicolette de Keizer, Ronald Cornet, Tinca J C Polderman

JMIR Ment Health 2024 (Dec 19); 11:e59113

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An Automatic and End-to-End System for Rare Disease Knowledge Graph Construction Based on Ontology-Enhanced Large Language Models: Development Study

Lang Cao, Jimeng Sun, Adam Cross

JMIR Med Inform 2024 (Dec 18); 12:e60665

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Enhancing Standardized and Structured Recording by Elderly Care Physicians for Reusing Electronic Health Record Data: Interview Study

Charlotte A W Albers, Yvonne Wieland-Jorna, Martine C de Bruijne, Martin Smalbrugge, Karlijn J Joling, Marike E de Boer

JMIR Med Inform 2024 (Dec 13); 12:e63710

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Using Large Language Models to Abstract Complex Social Determinants of Health From Original and Deidentified Medical Notes: Development and Validation Study

Alexandra Ralevski, Nadaa Taiyab, Michael Nossal, Lindsay Mico, Samantha Piekos, Jennifer Hadlock

J Med Internet Res 2024 (Nov 19); 26:e63445

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Visual Modeling Languages in Patient Pathways: Scoping Review

Binyam Bogale, Märt Vesinurm, Paul Lillrank, Elisabeth Gulowsen Celius, Ragnhild Halvorsrud

Interact J Med Res 2024 (Nov 15); 13:e55865

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The Impact of International Classification of Disease–Triggered Prescription Support on Telemedicine: Observational Analysis of Efficiency and Guideline Adherence

Tarso Augusto Duenhas Accorsi, Anderson Aires Eduardo, Carlos Guilherme Baptista, Flavio Tocci Moreira, Renata Albaladejo Morbeck, Karen Francine Köhler, Karine de Amicis Lima, Carlos Henrique Sartorato Pedrotti

JMIR Med Inform 2024 (Oct 25); 12:e56681

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Bridging Data Models in Health Care With a Novel Intermediate Query Format for Feasibility Queries: Mixed Methods Study

Lorenz Rosenau, Julian Gruendner, Alexander Kiel, Thomas Köhler, Bastian Schaffer, Raphael W Majeed

JMIR Med Inform 2024 (Oct 14); 12:e58541

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Enhancing the Functionalities of Personal Health Record Systems: Empirical Study Based on the HL7 Personal Health Record System Functional Model Release 1

Teng Cao, Zhi Chen, Masaharu Nakayama

JMIR Med Inform 2024 (Oct 09); 12:e56735

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Use of SNOMED CT in Large Language Models: Scoping Review

Eunsuk Chang, Sumi Sung

JMIR Med Inform 2024 (Oct 07); 12:e62924

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Toward Better Semantic Interoperability of Data Element Repositories in Medicine: Analysis Study

Zhengyong Hu, Anran Wang, Yifan Duan, Jiayin Zhou, Wanfei Hu, Sizhu Wu

JMIR Med Inform 2024 (Sep 30); 12:e60293

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An Ontology to Bridge the Clinical Management of Patients and Public Health Responses for Strengthening Infectious Disease Surveillance: Design Science Study

Sachiko Lim, Paul Johannesson

JMIR Form Res 2024 (Sep 26); 8:e53711

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PCEtoFHIR: Decomposition of Postcoordinated SNOMED CT Expressions for Storage as HL7 FHIR Resources

Tessa Ohlsen, Josef Ingenerf, Andrea Essenwanger, Cora Drenkhahn

JMIR Med Inform 2024 (Sep 17); 12:e57853

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Natural Language Processing Versus Diagnosis Code–Based Methods for Postherpetic Neuralgia Identification: Algorithm Development and Validation

Chengyi Zheng, Bradley Ackerson, Sijia Qiu, Lina S Sy, Leticia I Vega Daily, Jeannie Song, Lei Qian, Yi Luo, Jennifer H Ku, Yanjun Cheng, Jun Wu, Hung Fu Tseng

JMIR Med Inform 2024 (Sep 10); 12:e57949

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Impact of Gold-Standard Label Errors on Evaluating Performance of Deep Learning Models in Diabetic Retinopathy Screening: Nationwide Real-World Validation Study

Yueye Wang, Xiaotong Han, Cong Li, Lixia Luo, Qiuxia Yin, Jian Zhang, Guankai Peng, Danli Shi, Mingguang He

J Med Internet Res 2024 (Aug 14); 26:e52506

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Research on Traditional Chinese Medicine: Domain Knowledge Graph Completion and Quality Evaluation

Chang Liu, Zhan Li, Jianmin Li, Yiqian Qu, Ying Chang, Qing Han, Lingyong Cao, Shuyuan Lin

JMIR Med Inform 2024 (Aug 02); 12:e55090

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Unsupervised Feature Selection to Identify Important ICD-10 and ATC Codes for Machine Learning on a Cohort of Patients With Coronary Heart Disease: Retrospective Study

Peyman Ghasemi, Joon Lee

JMIR Med Inform 2024 (Jul 26); 12:e52896

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Introducing Attribute Association Graphs to Facilitate Medical Data Exploration: Development and Evaluation Using Epidemiological Study Data

Louis Bellmann, Alexander Johannes Wiederhold, Leona Trübe, Raphael Twerenbold, Frank Ückert, Karl Gottfried

JMIR Med Inform 2024 (Jul 24); 12:e49865

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Integrating Clinical Data and Medical Imaging in Lung Cancer: Feasibility Study Using the Observational Medical Outcomes Partnership Common Data Model Extension

Hyerim Ji, Seok Kim, Leonard Sunwoo, Sowon Jang, Ho-Young Lee, Sooyoung Yoo

JMIR Med Inform 2024 (Jul 12); 12:e59187

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Is Boundary Annotation Necessary? Evaluating Boundary-Free Approaches to Improve Clinical Named Entity Annotation Efficiency: Case Study

Gabriel Herman Bernardim Andrade, Shuntaro Yada, Eiji Aramaki

JMIR Med Inform 2024 (Jul 02); 12:e59680

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